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Reactome integration

Run pathway enrichment analyses on gene lists and look up pathways, reactions and molecules in the public Reactome knowledgebase. No key or sign-up needed. Read-only.

Data and analyticsProductivity0 triggers · 7 actions
Connect Reactome freeSee what you can automate

Build it by describing it

Type a sentence like this and the copilot builds, validates and simulates the workflow.
Every morning, read yesterday's new leads from my form, and for each one “Analyze Gene List (Pathway Enrichment)” in Reactome.
  • Simulated before it goes live
  • Fixes proposed when something breaks
  • One credit per run

Actions

Then Calibra can do this for you
  • DO
    Analyze Gene List (Pathway Enrichment)

    Sends a list of genes or proteins to the Reactome Analysis Service and returns the pathways where they are over-represented, sorted by significance (p-value and FDR).

  • DO
    Get Analysis Result

    Gets a previous Reactome analysis again by its token, for example to read more pages of pathways, without sending the genes again.

  • DO
    Get Entry

    Gets the full Reactome record of a pathway, reaction or physical entity by its stable identifier (for example R-HSA-141409).

  • DO
    Get Entry Field

    Gets a single field of a Reactome record, for example its displayName or compartment, as plain text.

  • DO
    Get Participating Molecules

    Lists the physical entities (proteins, complexes, small molecules…) that take part in a Reactome reaction or pathway.

  • DO
    Get Database Version

    Gets the current Reactome release number, useful to record which version your results come from.

  • DO
    Custom Reactome API Request (read-only)

    Makes a GET request to any endpoint of the Reactome Content Service (or, with a full URL, the Analysis Service), for example /data/query/R-HSA-141409.

Questions

Is the Reactome integration free?

Yes. Reactome is available on every Calibra plan, including the free plan, which needs no card.

How is Reactome usage billed?

Calibra charges one credit per workflow run, however many steps it has. Steps that read from or write to this app do not cost extra.

Can I connect Reactome without writing code?

Yes. Describe the process in plain words and the AI copilot builds the workflow with Reactome for you. You can also use templates or the visual editor.

Describe your first process. Watch it run today.

Free plan, no card. One credit per run, however many steps it has.

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